Search results for " ab initio"

showing 10 items of 25 documents

Characterization of the pressure induced Ringwoodite toMg-perovskite and Mg-wüstite phase transition by Catastrophe Theory

2010

Bader’s topological analysis Catastrophe Theory ab initio critical points
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The pressure-induced ringwoodite to Mg-perovskite and periclase post-spinel phase transition: a Bader’s topological analysis of the ab initio electro…

2011

In order to characterize the pressure-induced decomposition of ringwoodite (c-Mg2SiO4), the topological analysis of the electron density q(r), based upon the theory of atoms in molecules (AIM) developed by Bader in the framework of the catastrophe theory, has been performed. Calculations have been carried out by means of the ab initio CRYSTAL09 code at the HF/DFT level, using Hamiltonians based on the Becke- LYP scheme containing hybrid Hartree– Fock/density functional exchange–correlation terms. The equation of state at 0 K has been constructed for the three phases involved in the post-spinel phase transition (ringwoodite -> Mg-perovskite + periclase) occurring at the transition zone–lower…

Bader’s topological analysisElectron densityEquation of statePhase transitionRingwoodite Post-spinel phase transition Bader’s topological analysis Ab initio Catastrophe theory Critical pointsChemistryCatastrophe theoryAtoms in moleculesRingwooditeAb initioCritical pointsHartreeengineering.materialTopologyRingwoodite; Post-spinel phase transition; Bader’s topological analysis; Ab initio; Catastrophe theory; Critical pointsPost-spinel phase transitionRingwooditeGeochemistry and PetrologyBader’s topological analysiAb initioengineeringGeneral Materials SciencePerovskite (structure)
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Theoretical study of the low‐lying states of trans‐1,3‐butadiene

1992

We present extensive ab initio calculations on the low‐lying electronic states of trans‐1,3‐butadiene within the multireference configuration interaction (MRCI) framework by selecting the configurations with a perturbative criterion. The X 1Ag ground state and 1 3Bu, 1 3Ag, 2 1Ag, and 1 1Bu valence excited states have been calculated at a fixed geometry. The results obtained are in good agreement with previous experimental and calculated values, and could help to understand polyene spectroscopy, photochemistry, and photophysics. The advantages of a MRCI method where the most important contributions to the total MRCI wave function, perturbatively selected, are treated variationally, and the …

ButadieneElectronic correlationChemistryGeneral Physics and AstronomyMultireference configuration interactionPolyenesConfiguration interactionChromophoresUNESCO::FÍSICA::Química físicaConfiguration InteractionComputational chemistryAb initio quantum chemistry methodsExcited stateButadiene ; Ab Initio Calculations ; Configuration Interaction ; Perturbation Theory ; Energy Levels ; Molecular Orbital Method ; Polyenes ; Biology ; ChromophoresEnergy LevelsPerturbation TheoryPerturbation theory (quantum mechanics)Molecular Orbital MethodPhysical and Theoretical ChemistryAtomic physicsGround stateWave function:FÍSICA::Química física [UNESCO]Ab Initio CalculationsBiology
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Modelling of thermo-chemical properties over the sub-solidus MgO–FeO binary, as a function of iron spin configuration, composition and temperature

2014

Thermo-chemical properties and T–X phase relations diagram of the (Mg,Fe)O solid solution are modelled using mixing Helmholtz energy, ΔF(T,x)mixing, calculated by quantum mechanical and semi-empirical techniques. The sub-solidus MgO–FeO binary has been explored as a function of composition, with iron either in high-spin (HS) or low-spin (LS) configuration. Only the HS model provides physically sound results at room pressure, yielding a correct trend of cell edge versus composition, whereas LS’s issues are at variance with observations. Mixing Helmholtz energy has been parametrized by the following relationship: ΔF(T,x)mixing = x × y × [U0(T) + U1(T) × (x – y) + U2(T) × (x − y)2]−T × S(x,y)c…

ChemistryDegrees of freedom (physics and chemistry)(MgFe)OThermodynamicsSolidusMixing energyGibbs free energyMixing energy; Ab initio and semi-empirical modelling; (Mg; Fe)Osymbols.namesakeCrystallography(MgFe)O; Ab initio and semi-empirical modelling; Mixing energy; Geochemistry and Petrology; Materials Science (all)Geochemistry and PetrologyPhase (matter)Helmholtz free energysymbolsRelaxation (physics)General Materials ScienceMaterials Science (all)(MgFe)OAb initio and semi-empirical modellingMixing (physics)Solid solutionPhysics and Chemistry of Minerals
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Ab initio determination of the ionization potentials of DNA and RNA nucleobases

2006

Quantum chemical high level ab initio coupled-cluster and multiconfigurational perturbation methods have been used to compute vertical and adiabatic ionization potentials of the five canonical DNA and RNA nucleobases: uracil, thymine, cytosine, adenine, and guanine. Several states of their cations have been also calculated. The present results represent a systematic compendium of these magnitudes, establishing theoretical reference values at a level not reported before, calibrating computational strategies, and guiding the assignment of the features in the experimental photoelectron spectra. Daniel.Roca@uv.es Mercedes.Rubio@uv.es Manuela.Merchan@uv.es Luis.Serrano@uv.es

DNA ; Macromolecules ; Ionisation potential ; Photoelectron spectra ; Molecular biophysics ; Ab initio calculations ; Coupled cluster calculations ; Perturbation theoryGuanineGuaninePhotochemistryAb initioBiophysicsGeneral Physics and AstronomyIonisation potentialPerturbation theoryNucleobasechemistry.chemical_compoundCytosinePhotoelectron spectraCoupled cluster calculationsAb initio quantum chemistry methodsComputational chemistryIonizationPhysics::Atomic and Molecular ClustersPhysical and Theoretical ChemistryUracil:FÍSICA::Química física [UNESCO]IonsPhysics::Biological PhysicsQuantitative Biology::BiomoleculesBase CompositionChemistry PhysicalAdenineUracilDNAMolecular biophysicsQuantitative Biology::GenomicsThymineUNESCO::FÍSICA::Química físicachemistryMacromoleculesCalibrationQuantum TheoryRNAAb initio calculationsCytosineSoftwareThymine
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High-pressure structural, elastic, and thermodynamic properties of zircon-type HoPO4 and TmPO4

2017

[EN] Zircon-type holmium phosphate (HoPO4) and thulium phosphate (TmPO4) have been studied by single-crystal x-ray diffraction and ab initio calculations. We report on the influence of pressure on the crystal structure, and on the elastic and thermodynamic properties. The equation of state for both compounds is accurately determined. We have also obtained information on the polyhedral compressibility which is used to explain the anisotropic axial compressibility and the bulk compressibility. Both compounds are ductile and more resistive to volume compression than to shear deformation at all pressures. Furthermore, the elastic anisotropy is enhanced upon compression. Finally, the calculation…

DiffractionZirconEquation of stateMaterials scienceEcuación de estadoThermodynamicsFOS: Physical sciences02 engineering and technologyCrystal structurezircon01 natural sciencesCondensed Matter::Materials ScienceAb initio quantum chemistry methods0103 physical sciencesGeneral Materials Science010306 general physicsAnisotropySofteningOrthophosphateCondensed Matter - Materials ScienceEquation of stateorthophosphateElastic propertiesMaterials Science (cond-mat.mtrl-sci)Difracción de rayos X021001 nanoscience & nanotechnologyCondensed Matter PhysicsCompression (physics)Cálculos ab initioX-ray diffractionHigh pressureFISICA APLICADAZirconioCompressibilityOrtofosfatosAb initio calculationselastic properties0210 nano-technologyPropiedades elásticasAlta presión
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Towards an accurate molecular orbital theory for excited states : Ethene, butadiene, and hexatriene

1993

A newly proposed quantum chemical approach for ab initio calculations of electronic spectra of molecular systems is applied to the molecules ethene, trans‐1,3‐butadiene, and trans‐trans‐1,3,5‐hexatriene. The method has the aim of being accurate to better than 0.5 eV for excitation energies and is expected to provide structural and physical data for the excited states with good reliability. The approach is based on the complete active space (CAS) SCF method, which gives a proper description of the major features in the electronic structure of the excited state, independent of its complexity, accounts for all near degeneracy effects, and includes full orbital relaxation. Remaining dynamic ele…

ErrorsGeneral Physics and AstronomyPolyenesElectronic structuresymbols.namesakeRydberg StatesAb initio quantum chemistry methodsComputational chemistrySinglet statePhysical and Theoretical ChemistryTriplet state:FÍSICA::Química física [UNESCO]AccuracyExcitationCalculation MethodsButadieneTripletsChemistryMolecular orbital theoryScf CalculationsExcited StatesCalculation Methods ; Quantum Chemistry ; Ab Initio Calculations ; Electron Spectra ; Butadiene ; Accuracy ; Scf Calculations ; Triplets ; Rydberg States ; Excitation ; Errors ; Polyenes ; Excited StatesQuantum ChemistryUNESCO::FÍSICA::Química físicaElectron SpectraExcited stateRydberg formulasymbolsRydberg stateAtomic physicsAb Initio Calculations
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Electron-density critical points analysis and catastrophe theory to forecast structure instability in periodic solids

2018

The critical points analysis of electron density,i.e. ρ(x), fromab initiocalculations is used in combination with the catastrophe theory to show a correlation between ρ(x) topology and the appearance of instability that may lead to transformations of crystal structures, as a function of pressure/temperature. In particular, this study focuses on the evolution of coalescing non-degenerate critical points,i.e. such that ∇ρ(xc) = 0 and λ1, λ2, λ3≠ 0 [λ being the eigenvalues of the Hessian of ρ(x) atxc], towards degenerate critical points,i.e. ∇ρ(xc) = 0 and at least one λ equal to zero. The catastrophe theory formalism provides a mathematical tool to model ρ(x) in the neighbourhood ofxcand allo…

Hessian matrixElectron densitycatastrophe theory010504 meteorology & atmospheric sciencesCondensed Matter Physic010502 geochemistry & geophysics01 natural sciencesBiochemistryInstabilityInorganic Chemistrysymbols.namesakeStructural BiologyAb initio quantum chemistry methodsGeneral Materials Sciencephase/state transitions in crystalPhysical and Theoretical Chemistryphase/state transitions in crystalsEigenvalues and eigenvectors0105 earth and related environmental sciencesPhysicsab initio calculationelectron-density critical pointCondensed matter physicsab initio calculationsDegenerate energy levelsCondensed Matter PhysicsGibbs free energyelectron-density critical points catastrophe theory phase/state transitions in crystals ab initio calculations.symbolsMaterials Science (all)Catastrophe theoryelectron-density critical points
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Molecular dynamics simulations of elementary chemical processes in liquid water using combined density functional and molecular mechanics potentials.…

1997

The first molecular dynamics (MD) simulation of a chemical process in solution with an ab initio description of the reactant species and a classical representation of the solvent is presented. We study the dynamics of proton (deuterium) transfer in strongly hydrogen-bonded systems characterized by an energy surface presenting a double well separated by a low activation barrier. We have chosen the hydroxyl-water complex in liquid water to analyze the coupling between the reactive system and the environment. The proton is transferred from one well to the other with a frequency close to 1 ps−1 which is comparable to the low-frequency band associated to hindered translations, diffusional transl…

Hydrogen bonds ; Molecular dynamics method ; Ab initio calculations Ion exchange ; Solvent effects ; Reaction kinetics theory ; Density functional theory ; Intermolecular mechanicsProtonChemistryGeneral Physics and AstronomyIntermolecular mechanicsMolecular dynamics methodHydrogen bondsUNESCO::FÍSICA::Química físicaMolecular dynamicsAb initio calculations Ion exchangeDeuteriumReaction dynamicsChemical physicsComputational chemistryAb initio quantum chemistry methodsSolvent effectsReaction kinetics theoryDensity functional theoryDensity functional theoryPhysical and Theoretical ChemistrySolvent effectsChemical equilibrium:FÍSICA::Química física [UNESCO]
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Vibrational Signature of Water Molecules in Asymmetric Hydrogen Bonding Environments

2013

The O–H stretching vibrational modes of water molecules are sensitive to their local environments. Here, we applied effective normal-mode analysis to isolate contributions of each of the two hydrogen atoms to the vibrational modes ν1 and ν3 of water molecules in the liquid phase. We demonstrate that the decoupling of the two contributions fd and the frequency splitting of the vibrational modes Δω13 are inextricably related to the symmetry of the hydrogen bonding environment. We show that ambient liquid water modeled at the density functional level of theory exhibits the characteristics of an asymmetric environment with an average decoupling of 0.82 and a splitting of 137 inverse centimeters…

HydrogenAnalytical chemistryInfrared spectroscopychemistry.chemical_elementInverseinterfacial water010402 general chemistry01 natural sciencessymbols.namesake0103 physical sciencesMoleculeGeneral Materials SciencePhysical and Theoretical Chemistryinhomogeneous broadeningliquid water010304 chemical physicsHydrogen bondab initio molecular dynamicsvibrational analysis; ab initio molecular dynamics; interfacial water; liquid water; inhomogeneous broadeningDecoupling (cosmology)vibrational analysis0104 chemical scienceschemistryChemical physicsMolecular vibrationsymbolsRaman spectroscopyJOURNAL OF PHYSICAL CHEMISTRY LETTERS
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